INSPIRE.PEACH.COVID.2022.V1
A Platform for Evaluation and Analysis of COVID-19 Harmonised data (PEACH): Metadata
Name | Country code |
---|---|
Malawi | MW |
Uganda | UG |
Kenya | KE |
The emergence of COVID-19 as a global pandemic has posed a critical health threat to numerous low-and-middle-income countries (LMICs) and the well-being of their populations. Timely and precise data are imperative for adapting health policies and strategies to effectively combat this threat. However, obtaining such data is a challenge, particularly under lockdown restrictions, necessitating innovative approaches to data collection and aggregation.
Leveraging Artificial Intelligence (AI) and Data Science (DS) innovations is paramount to acquire accurate, real-time data from diverse sources in LMICs. Additionally, addressing methodological gaps in data integration and enhancing information and research capacity is essential for informed decision-making and effective public health policy formulation.
Integrated Disease Surveillance and Response (IDSR) is a pivotal strategy for the early detection and efficient management of infectious disease outbreaks. It entails the systematic collection, analysis, and dissemination of surveillance data from diverse sources. Endorsed by the World Health Organization (WHO) and the Centers for Disease Control and Prevention (CDC), IDSR is globally utilized to proactively prevent, detect, and address public health threats.
In Malawi, Kenya and Uganda, IDSR program is implemented by the Ministry of Health. The data collected can include information on cases and deaths, risk factors, and transmission patterns, as well as information on public health measures such as testing, contact tracing, and quarantine. The IDSR Case Based Reporting Form may vary depending on the specific needs and resources of each country.
The Implementation Network for Sharing Population Information from Research Entities (INSPIRE) is a global initiative aimed at improving public health by facilitating the sharing of population-level health data among researchers and public health authorities. INSPIRE has build a data hub for standardizing and harmonizing IDSR COVID-19 data and implemented the Observational Medical Outcomes Partnership (OMOP) using a Common Data Model (CDM). OMOP CDM facilitates comprehensive analysis across multiple datasets and support sharing of FAIR (Findable, Accessible, Interoperable, Reusable) data which will be used for evidence-informed policy decision making.
INSPIRE.PEACH.V1.0 Metadata for public distribution.
Topic | Vocabulary | URI |
---|---|---|
COVID-19 | MeSH | http://www.ncbi.nlm.nih.gov/mesh |
SARS-CoV-2 | MeSH | http://www.ncbi.nlm.nih.gov/mesh |
COVID-19 Vaccines | MeSH | http://www.ncbi.nlm.nih.gov/mesh |
Transmission | MeSH | http://www.ncbi.nlm.nih.gov/mesh |
Specimen | MeSH | http://www.ncbi.nlm.nih.gov/mesh |
Diagnosis | MeSH | http://www.ncbi.nlm.nih.gov/mesh |
pre-existing condition | MeSH | http://www.ncbi.nlm.nih.gov/mesh |
Symptom(s) | MeSH | http://www.ncbi.nlm.nih.gov/mesh |
This project will exploit data from three African countries - Kenya, Malawi and Ugandai to develop a scalable, coordinated COVID-19 data ecosystem. The three countries adopted different strategies in combating the pandemic
Name | Affiliation |
---|---|
Dr Amelia Taylor | MUBAS |
Dr Sylvia Muyingo | APHRC |
Prof Jim Todd | LSHTM |
Public Health Institute of Malawi | Public Health Institute of Malawi |
Name | Affiliation | Role |
---|---|---|
David Amadi | LSHTM | DDI author |
Amelia Taylor | MUBAS | Technical Assistance |
Tathagata Bhattacharjee | LSHTM | Technical Assistance |
Name | Abbreviation | Role |
---|---|---|
International Development Research Centre | IDRC Global South AI4COVID Program | Current Funder |
Name | Affiliation | Role |
---|---|---|
Public Health Institute of Malawi | Malawi MOH | Providing Data |
Malawi University of Business and Applied Sciences | MUBAS | Providing IT Infrastucture for Data Processing |
African Population and Health Research Center | APHRC | Providing IT Infrastucture for Data Processing |
From 2020
Organization name | Abbreviation | URL |
---|---|---|
INSPIRE Network | INSPIRE | https://www.inspiredata.network/ |
This dataset documentation is licensed under a Creative Commons Attribution-Non Commercial 4.0 International Public License.
Name | Affiliation | URL | |
---|---|---|---|
Jim Todd | LSHTM | jim.todd@lshtm.ac.uk | https://www.inspiredata.network/ |
David Amadi | LSHTM | david.amadi@lshtm.ac.uk | https://www.inspiredata.network/ |
DDI.INSPIRE.PEACH.2022.V1.0
Name | Abbreviation | Affiliation | Role |
---|---|---|---|
Amelia Taylor | AT | MUBAS | Documentation of Study and Review of the metadata |
Jim Todd | JT | LSHTM | Documentation of Study and Review of the metadata |
Sylvia Muyingo | JT | APHRC | Documentation of Study and Review of the metadata |
David Amadi | DA | LSHTM | Documentation of Study and Review of the metadata |